{
  "annotation_id": "fb2cfc96-d27c-453c-b7a1-a1bc2d6bdaa6",
  "date_created": "2026-03-02T18:01:32.275000Z",
  "date_modified": "2026-03-02T18:01:32.275000Z",
  "file_hash": "4b44c8ee42a35d898fc3f0ea8c9f95feda4b168059624a08d7967e43d25a986f",
  "private": false,
  "record": {
    "abstract": "A simple approach is proposed to investigate the protein structure. Using a\nlow complexity model, a simple pairwise interaction and the concept of global\noptimization, we are able to calculate ground states of proteins, which are in\nagreement with experimental data. All possible model structures of small\nproteins are available below a certain energy threshold. The exact lowenergy\nlandscapes for the trp cage protein (1L2Y) is presented showing the\nconnectivity of all states and energy barriers.",
    "arxiv_id": "q-bio/0412031",
    "authors": [
      "F. Dressel",
      "S. Kobe"
    ],
    "categories": [
      "q-bio.BM"
    ],
    "doi": "10.1016/j.cplett.2006.05.007",
    "journal_ref": "Chem. Phys. Lett. 424 (2006) 369",
    "title": "Global optimization of proteins using a dynamical lattice model: Ground   states and energy landscapes",
    "url": "https://arxiv.org/abs/q-bio/0412031"
  },
  "schema_id": "dorsal/arxiv",
  "source": {
    "execution_id": "e3fd426c-d1a5-4f1a-aef0-8648b0872315",
    "id": "arXiv Dataset IDs",
    "type": "Model",
    "variant": "snapshot-2026-03-01",
    "version": "0.1.0"
  },
  "user_id": 1000002
}