dorsal/arxiv
View SchemaCharacteristic Length Scale of Electric Transport Properties of Genomes
| Authors | C. T. Shih |
|---|---|
| Categories | |
| ArXiv ID | physics/0509243 |
| URL | https://arxiv.org/abs/physics/0509243 |
| DOI | 10.1103/PhysRevE.74.010903 |
Abstract
A tight-binding model together with a novel statistical method are used to investigate the relation between the sequence-dependent electric transport properties and the sequences of protein-coding regions of complete genomes. A correlation parameter $\Omega$ is defined to analyze the relation. For some particular propagation length $w_{max}$, the transport behaviors of the coding and non-coding sequences are very different and the correlation reaches its maximal value $\Omega_{max}$. $w_{max}$ and \omax are characteristic values for each species. The possible reason of the difference between the features of transport properties in the coding and non-coding regions is the mechanism of DNA damage repair processes together with the natural selection.
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"abstract": "A tight-binding model together with a novel statistical method are used to\ninvestigate the relation between the sequence-dependent electric transport\nproperties and the sequences of protein-coding regions of complete genomes. A\ncorrelation parameter $\\Omega$ is defined to analyze the relation. For some\nparticular propagation length $w_{max}$, the transport behaviors of the coding\nand non-coding sequences are very different and the correlation reaches its\nmaximal value $\\Omega_{max}$. $w_{max}$ and \\omax are characteristic values for\neach species. The possible reason of the difference between the features of\ntransport properties in the coding and non-coding regions is the mechanism of\nDNA damage repair processes together with the natural selection.",
"arxiv_id": "physics/0509243",
"authors": [
"C. T. Shih"
],
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"physics.bio-ph"
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"doi": "10.1103/PhysRevE.74.010903",
"title": "Characteristic Length Scale of Electric Transport Properties of Genomes",
"url": "https://arxiv.org/abs/physics/0509243"
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