{
  "annotation_id": "c47a79f4-43e7-49ca-b67d-a0719f11b4b5",
  "date_created": "2026-03-02T18:01:32.172000Z",
  "date_modified": "2026-03-02T18:01:32.172000Z",
  "file_hash": "e9bee569c09b465276a7f80300dfc017a5a8684ca7b9544d9f825aef4b80784f",
  "private": false,
  "record": {
    "abstract": "We introduce a three-dimensional stochastic reaction-diffusion model to\ndescribe MinD/MinE dynamical structures in Escherichia coli. This model\nspontaneously generates pole-to-pole oscillations of the membrane-associated\nMinD proteins, MinE ring, as well as filaments of the membrane-associated MinD\nproteins. Experimental data suggest MinD filaments are two-stranded. In order\nto model them we assume that each membrane-associated MinD protein can form up\nto three bonds with adjacent membrane associated MinD molecules and that MinE\ninduced hydrolysis strongly depends on the number of bonds MinD has\nestablished.",
    "arxiv_id": "q-bio/0505051",
    "authors": [
      "Nenad Pavin",
      "Hana Cipcic Paljetak",
      "Vladimir Krstic"
    ],
    "categories": [
      "q-bio.SC",
      "physics.bio-ph",
      "q-bio.OT"
    ],
    "doi": "10.1103/PhysRevE.73.021904",
    "journal_ref": "Phys. Rev. E 73, 021904 (2006)",
    "title": "Min-protein oscillations in Escherichia coli with spontaneous formation   of two-stranded filaments in a three-dimensional stochastic   reaction-diffusion model",
    "url": "https://arxiv.org/abs/q-bio/0505051"
  },
  "schema_id": "dorsal/arxiv",
  "source": {
    "execution_id": "5481ee99-e97a-4b66-9742-35cb2e9cf8e7",
    "id": "arXiv Dataset IDs",
    "type": "Model",
    "variant": "snapshot-2026-03-01",
    "version": "0.1.0"
  },
  "user_id": 1000002
}