dorsal/arxiv
View SchemaWeighted-Codon-Usage Based Phylogeny In Ectocarpales
| Authors | Smarajit Das, Jayprokas Chakrabarti, Zhumur Ghosh, Satyabrata Sahoo, Bibekanand Mallick |
|---|---|
| Categories | |
| ArXiv ID | q-bio/0506003 |
| URL | https://arxiv.org/abs/q-bio/0506003 |
| Journal | Journal of Bioscience, 30(5),699--709(2005) |
Abstract
We analyse forty seven chloroplastid genes of the large subunit of RuBisCO, from the Algal order Ectocarpales, sourced from GenBank. Codon-usage weighted by the nucleotide base bias defines our score called the Codon-Impact-Parameter. This score is used to obtain phylogenetic relations amongst the 47 Ectocarpales. We compare our classification with the ones done earlier.
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"abstract": "We analyse forty seven chloroplastid genes of the large subunit of RuBisCO,\nfrom the Algal order Ectocarpales, sourced from GenBank. Codon-usage weighted\nby the nucleotide base bias defines our score called the\nCodon-Impact-Parameter. This score is used to obtain phylogenetic relations\namongst the 47 Ectocarpales. We compare our classification with the ones done\nearlier.",
"arxiv_id": "q-bio/0506003",
"authors": [
"Smarajit Das",
"Jayprokas Chakrabarti",
"Zhumur Ghosh",
"Satyabrata Sahoo",
"Bibekanand Mallick"
],
"categories": [
"q-bio.GN",
"q-bio.PE"
],
"journal_ref": "Journal of Bioscience, 30(5),699--709(2005)",
"title": "Weighted-Codon-Usage Based Phylogeny In Ectocarpales",
"url": "https://arxiv.org/abs/q-bio/0506003"
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