{
  "annotation_id": "9f92b263-531c-4aa1-bd94-29b3c77924a5",
  "date_created": "2026-03-02T18:01:31.543000Z",
  "date_modified": "2026-03-02T18:01:31.543000Z",
  "file_hash": "2d8a7fc4200acdafa20a66a9bce4ecfba82e89ab0c1a0f8383d15a3bdd272475",
  "private": false,
  "record": {
    "abstract": "An overview of theories related to vibrational energy relaxation (VER) in\nproteins is presented. VER of a selected mode in cytochrome c is studied using\ntwo theoretical approaches. One is the equilibrium simulation approach with\nquantum correction factors, and the other is the reduced model approach which\ndescribes the protein as an ensemble of normal modes interacting through\nnonlinear coupling elements. Both methods result in estimates of the VER time\n(sub ps) for a CD stretching mode in the protein at room temperature. The\ntheoretical predictions are in accord with the experimental data of Romesberg\u0027s\ngroup. A perspective on future directions for the detailed study of time scales\nand mechanisms for VER in proteins is presented.",
    "arxiv_id": "q-bio/0412048",
    "authors": [
      "Hiroshi Fujisaki",
      "John E. Straub"
    ],
    "categories": [
      "q-bio.BM"
    ],
    "title": "Vibrational energy relaxation in proteins",
    "url": "https://arxiv.org/abs/q-bio/0412048"
  },
  "schema_id": "dorsal/arxiv",
  "source": {
    "execution_id": "6149501a-8a34-459f-9dc0-0bc65febd907",
    "id": "arXiv Dataset IDs",
    "type": "Model",
    "variant": "snapshot-2026-03-01",
    "version": "0.1.0"
  },
  "user_id": 1000002
}