{
  "annotation_id": "45b5c8b7-a595-4c28-b8ba-1331bf96f5a5",
  "date_created": "2026-03-02T18:01:31.934000Z",
  "date_modified": "2026-03-02T18:01:31.934000Z",
  "file_hash": "947e351350cef7645c8e6760f82767fbcfe40b8a48ca6e0a85b1f28aef0a5725",
  "private": false,
  "record": {
    "abstract": "The translocation of structured RNA or DNA molecules through narrow pores\nnecessitates the opening of all base pairs. Here, we study the interplay\nbetween the dynamics of translocation and base-pairing theoretically, using\nkinetic Monte Carlo simulations and analytical methods. We find that the\ntransient formation of basepairs that do not occur in the ground state can\nsignificantly speed up translocation.",
    "arxiv_id": "q-bio/0508004",
    "authors": [
      "Ralf Bundschuh",
      "Ulrich Gerland"
    ],
    "categories": [
      "q-bio.BM",
      "cond-mat.soft"
    ],
    "doi": "10.1103/PhysRevLett.95.208104",
    "title": "Coupled dynamics of RNA folding and nanopore translocation",
    "url": "https://arxiv.org/abs/q-bio/0508004"
  },
  "schema_id": "dorsal/arxiv",
  "source": {
    "execution_id": "af613f52-7dae-4792-adae-6a0e376e6693",
    "id": "arXiv Dataset IDs",
    "type": "Model",
    "variant": "snapshot-2026-03-01",
    "version": "0.1.0"
  },
  "user_id": 1000002
}