dorsal/arxiv
View SchemaNew symmetry in nucleotide sequences
| Authors | M. A. Makarova, M. G. Sadovsky |
|---|---|
| Categories | |
| ArXiv ID | q-bio/0503009 |
| URL | https://arxiv.org/abs/q-bio/0503009 |
Abstract
Information valuable words are the strings with the significant deviation of real frequency from the expected one. The expected frequency is determined through the maximum entropy principle of the reconstructed (extended) frequency dictionary of strings composed from the shorter words. The information valuable words are found to be the complementary palindromes: they are read equally in opposite directions, if nucleotides are changed for the complementary ones (A <--> T; C <--> G) in one of them. Some properties of such symmetric words are discussed.
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"abstract": "Information valuable words are the strings with the significant deviation of\nreal frequency from the expected one. The expected frequency is determined\nthrough the maximum entropy principle of the reconstructed (extended) frequency\ndictionary of strings composed from the shorter words. The information valuable\nwords are found to be the complementary palindromes: they are read equally in\nopposite directions, if nucleotides are changed for the complementary ones (A\n\u003c--\u003e T; C \u003c--\u003e G) in one of them. Some properties of such symmetric words are\ndiscussed.",
"arxiv_id": "q-bio/0503009",
"authors": [
"M. A. Makarova",
"M. G. Sadovsky"
],
"categories": [
"q-bio.GN",
"q-bio.BM"
],
"title": "New symmetry in nucleotide sequences",
"url": "https://arxiv.org/abs/q-bio/0503009"
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