dorsal/arxiv
View SchemaBase sequence dependent sliding of proteins on DNA
| Authors | M. Barbi, C. Place, V. Popkov, M. Salerno |
|---|---|
| Categories | |
| ArXiv ID | q-bio/0403028 |
| URL | https://arxiv.org/abs/q-bio/0403028 |
| DOI | 10.1103/PhysRevE.70.041901 |
| Journal | Phys. Rev. E 70, 041901 (2004) |
Abstract
The possibility that the sliding motion of proteins on DNA is influenced by the base sequence through a base pair reading interaction, is considered. Referring to the case of the T7 RNA-polymerase, we show that the protein should follow a noise-influenced sequence-dependent motion which deviate from the standard random walk usually assumed. The general validity and the implications of the results are discussed.
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"abstract": "The possibility that the sliding motion of proteins on DNA is influenced by\nthe base sequence through a base pair reading interaction, is considered.\nReferring to the case of the T7 RNA-polymerase, we show that the protein should\nfollow a noise-influenced sequence-dependent motion which deviate from the\nstandard random walk usually assumed. The general validity and the implications\nof the results are discussed.",
"arxiv_id": "q-bio/0403028",
"authors": [
"M. Barbi",
"C. Place",
"V. Popkov",
"M. Salerno"
],
"categories": [
"q-bio.BM",
"cond-mat.soft",
"physics.bio-ph"
],
"doi": "10.1103/PhysRevE.70.041901",
"journal_ref": "Phys. Rev. E 70, 041901 (2004)",
"title": "Base sequence dependent sliding of proteins on DNA",
"url": "https://arxiv.org/abs/q-bio/0403028"
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